PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK05686.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 292aa    MW: 33671.6 Da    PI: 7.4978
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK05686.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM148.92.5e-46171423128
        NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100
                pGfrFhPt+eel+++yLk+ v+gk  ++ ++i +++iy ++Pw Lp+k+k +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++s    ++++
  PK05686.1  17 PGFRFHPTEEELLDFYLKNMVSGKM-SF-DIIGSLNIYLFDPWVLPEKAKLGEREWYFFVPRDRKHGSGGRPNRTTERGFWKATGSDRRIVSLsePKRVI 114
                9*********************998.44.89***************99999***************************************997656778* PP

        NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
                gl+ktLvfykgrap+g+ktdWvm+eyrl
  PK05686.1 115 GLRKTLVFYKGRAPRGTKTDWVMNEYRL 142
                **************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100554.05715160IPR003441NAC domain
SuperFamilySSF1019418.37E-5415160IPR003441NAC domain
PfamPF023652.7E-2517142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009965Biological Processleaf morphogenesis
GO:0010200Biological Processresponse to chitin
GO:0045792Biological Processnegative regulation of cell size
GO:0048281Biological Processinflorescence morphogenesis
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MAINSSMDPD VIPLDLPGFR FHPTEEELLD FYLKNMVSGK MSFDIIGSLN IYLFDPWVLP  60
EKAKLGEREW YFFVPRDRKH GSGGRPNRTT ERGFWKATGS DRRIVSLSEP KRVIGLRKTL  120
VFYKGRAPRG TKTDWVMNEY RLPDNCKLSK DIVLCKVYRK ATSLKVLEQR VQMEEEKNFQ  180
NEHNSPASPM DTFSFCSPHE ELIQFQPPLM AANDLVLKKE VEEVVGSATA VDNYNASFTT  240
ASLQVPYGYK LDKLPELQVP KLSLDWTQEQ FWTQLNSPWL QNMTPLANIL NL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A2e-481716322171NAC domain-containing protein 19
3swm_B2e-481716322171NAC domain-containing protein 19
3swm_C2e-481716322171NAC domain-containing protein 19
3swm_D2e-481716322171NAC domain-containing protein 19
3swp_A2e-481716322171NAC domain-containing protein 19
3swp_B2e-481716322171NAC domain-containing protein 19
3swp_C2e-481716322171NAC domain-containing protein 19
3swp_D2e-481716322171NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010103318.11e-143Putative NAC domain-containing protein 94
TrEMBLW9S9V71e-143W9S9V7_9R
STRINGGLYMA12G02540.11e-128(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62143251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-111NAC domain containing protein 36